We ran into this problem too. We have a 1U XServer (early 2008) and replaced three 80GB SATA Disks with Seagate ES.2 1000Gb SATA drives (product no: ST31000340NS). What seemed to resolve this issue was placing jumpers on the 1TB disks, therefore limiting the transfer-rate to 1.5Gb/s. Hope this helps you out as well.
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